Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv16A0A0B4J1H3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv16A0A0B4J1H3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv16A0A0B4J1H3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trbv16A0A0B4J1H3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Etf1-202ENSMUST00000180351 108 ntBASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv16A0A0B4J1H3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv16A0A0B4J1H3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv16A0A0B4J1H3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms