Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv5A0A0B4J1G9 Rarb-207ENSMUST00000225921 2756 ntBASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Gm11687-201ENSMUST00000118911 886 ntBASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv5A0A0B4J1G9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv5A0A0B4J1G9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv5A0A0B4J1G9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trbv5A0A0B4J1G9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv5A0A0B4J1G9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv5A0A0B4J1G9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms