Protein–RNA interactions for Protein: A0A087WP28

Gm28510, Predicted gene 28510, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28510A0A087WP28 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28510A0A087WP28 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28510A0A087WP28 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28510A0A087WP28 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28510A0A087WP28 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28510A0A087WP28 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
Gm28510A0A087WP28 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28510A0A087WP28 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28510A0A087WP28 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28510A0A087WP28 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28510A0A087WP28 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28510A0A087WP28 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm28510A0A087WP28 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm28510A0A087WP28 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm28510A0A087WP28 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms