Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13-2A0A075B649 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-2A0A075B649 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-2A0A075B649 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav13-2A0A075B649 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13-2A0A075B649 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-2A0A075B649 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms