Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Grk6-206ENSMUST00000224995 2971 ntBASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav8-1A0A075B641 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8-1A0A075B641 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav8-1A0A075B641 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav8-1A0A075B641 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Gm6311-201ENSMUST00000073790 878 ntBASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8-1A0A075B641 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms