Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm44848-201ENSMUST00000207808 3234 ntBASIC8.22□□□□□ -1.09
Trim63Q38HM4 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Extl2-201ENSMUST00000029575 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Zscan5b-201ENSMUST00000072662 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim63Q38HM4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Loxhd1-201ENSMUST00000035501 3814 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Gng7-201ENSMUST00000092285 3362 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Aldh8a1-201ENSMUST00000042699 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Glul-201ENSMUST00000086199 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim63Q38HM4 Gm37110-201ENSMUST00000192993 1628 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 Gm44183-201ENSMUST00000203964 1628 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Gm8873-201ENSMUST00000217847 1439 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC8.21□□□□□ -1.09
Trim63Q38HM4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 Kcna2-202ENSMUST00000196403 2430 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 C330018D20Rik-201ENSMUST00000025488 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Gm38195-201ENSMUST00000194247 1499 ntBASIC8.21□□□□□ -1.09
Trim63Q38HM4 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim63Q38HM4 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Erich3-201ENSMUST00000051862 2034 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm14006-201ENSMUST00000122132 981 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm15547-201ENSMUST00000122152 333 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm21990-201ENSMUST00000124692 383 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm10807-201ENSMUST00000177134 795 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm6180-201ENSMUST00000065243 498 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm10312-201ENSMUST00000078515 489 ntBASIC8.21□□□□□ -1.1
Trim63Q38HM4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Tmem135-201ENSMUST00000041968 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Suv39h1-202ENSMUST00000115637 2778 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim63Q38HM4 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim63Q38HM4 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.2□□□□□ -1.1
Trim63Q38HM4 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 AC154575.1-201ENSMUST00000227166 1474 ntBASIC8.2□□□□□ -1.1
Trim63Q38HM4 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Gm15927-203ENSMUST00000148641 1788 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Rnf41-202ENSMUST00000171342 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Tectb-201ENSMUST00000025936 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Gm45718-201ENSMUST00000207577 3794 ntBASIC8.2□□□□□ -1.1
Trim63Q38HM4 Lypd5-201ENSMUST00000032683 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Gm25148-201ENSMUST00000104611 123 ntBASIC8.2□□□□□ -1.1
Trim63Q38HM4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim63Q38HM4 Gm12645-201ENSMUST00000117297 275 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms