Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Cd9P40240 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC10.05□□□□□ -0.8
Cd9P40240 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.05□□□□□ -0.8
Cd9P40240 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC10.05□□□□□ -0.8
Cd9P40240 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cd9P40240 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.05□□□□□ -0.8
Cd9P40240 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd9P40240 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cd9P40240 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Cd9P40240 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cd9P40240 Gm25561-201ENSMUST00000104607 125 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Vmn1r-ps114-201ENSMUST00000121050 1040 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Gm6517-201ENSMUST00000121056 511 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.04□□□□□ -0.8
Cd9P40240 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cd9P40240 Gm22994-201ENSMUST00000175422 82 ntBASIC10.04□□□□□ -0.8
Cd9P40240 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.04□□□□□ -0.8
Cd9P40240 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.04□□□□□ -0.8
Cd9P40240 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.04□□□□□ -0.8
Cd9P40240 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 A1cf-204ENSMUST00000224564 1432 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cd9P40240 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm37962-201ENSMUST00000195535 2034 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Gm45757-201ENSMUST00000211835 1480 ntBASIC10.04□□□□□ -0.8
Cd9P40240 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cd9P40240 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd9P40240 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cd9P40240 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Gm36948-201ENSMUST00000194708 3247 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Gm25723-201ENSMUST00000104530 126 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Cd9P40240 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Gm11957-201ENSMUST00000118304 779 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.03□□□□□ -0.8
Cd9P40240 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cd9P40240 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cd9P40240 Gm8425-201ENSMUST00000171395 769 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Mir3547-201ENSMUST00000175461 88 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Gm2316-201ENSMUST00000190613 921 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Gm17815-201ENSMUST00000198305 895 ntBASIC10.03□□□□□ -0.8
Cd9P40240 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC10.03□□□□□ -0.8
Cd9P40240 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC10.03□□□□□ -0.8
Cd9P40240 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cd9P40240 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms