Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Atp6v1c1Q9Z1G3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6v1c1Q9Z1G3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
Atp6v1c1Q9Z1G3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.21■□□□□ 0.67
Atp6v1c1Q9Z1G3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6v1c1Q9Z1G3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atp6v1c1Q9Z1G3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Atp6v1c1Q9Z1G3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6v1c1Q9Z1G3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Atp6v1c1Q9Z1G3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Atp6v1c1Q9Z1G3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1c1Q9Z1G3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6v1c1Q9Z1G3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.15■□□□□ 0.66
Atp6v1c1Q9Z1G3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms