Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx9Q9WUH2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Lhx9Q9WUH2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Lhx9Q9WUH2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx9Q9WUH2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lhx9Q9WUH2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx9Q9WUH2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx9Q9WUH2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx9Q9WUH2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx9Q9WUH2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx9Q9WUH2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lhx9Q9WUH2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx9Q9WUH2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Gm40848-201ENSMUST00000221998 324 ntBASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx9Q9WUH2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Smad6-203ENSMUST00000179458 273 ntBASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx9Q9WUH2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx9Q9WUH2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.75■□□□□ 0.59
Lhx9Q9WUH2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx9Q9WUH2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.75■□□□□ 0.59
Lhx9Q9WUH2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lhx9Q9WUH2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lhx9Q9WUH2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms