Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Gm11421-201ENSMUST00000122124 294 ntBASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf22Q9ER62 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf22Q9ER62 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf22Q9ER62 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf22Q9ER62 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf22Q9ER62 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf22Q9ER62 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfrsf22Q9ER62 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Gm10493-201ENSMUST00000097270 612 ntBASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf22Q9ER62 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.38■□□□□ 0.53
Tnfrsf22Q9ER62 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms