Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lime1Q9EQR5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lime1Q9EQR5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lime1Q9EQR5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lime1Q9EQR5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lime1Q9EQR5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lime1Q9EQR5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Golph3-205ENSMUST00000228671 2842 ntBASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lime1Q9EQR5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lime1Q9EQR5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.14■□□□□ 0.34
Lime1Q9EQR5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lime1Q9EQR5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lime1Q9EQR5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms