Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm5812-201ENSMUST00000061073 957 ntBASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ssr1Q9CY50 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Gm7417-201ENSMUST00000192950 473 ntBASIC21.23■□□□□ 0.99
Ssr1Q9CY50 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Ssr1Q9CY50 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Etf1-202ENSMUST00000180351 108 ntBASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssr1Q9CY50 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssr1Q9CY50 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssr1Q9CY50 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Golph3-202ENSMUST00000226517 2359 ntBASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ssr1Q9CY50 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Ssr1Q9CY50 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.17■□□□□ 0.98
Ssr1Q9CY50 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssr1Q9CY50 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms