Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldnd1Q9CQX5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldnd1Q9CQX5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldnd1Q9CQX5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldnd1Q9CQX5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldnd1Q9CQX5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldnd1Q9CQX5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldnd1Q9CQX5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldnd1Q9CQX5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldnd1Q9CQX5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cldnd1Q9CQX5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldnd1Q9CQX5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Gm6211-202ENSMUST00000167849 925 ntBASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Gm37856-201ENSMUST00000191634 999 ntBASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldnd1Q9CQX5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cldnd1Q9CQX5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd1Q9CQX5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd1Q9CQX5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd1Q9CQX5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd1Q9CQX5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldnd1Q9CQX5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms