Protein–RNA interactions for Protein: Q91Y13

Pcdha7, Protocadherin alpha-7, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha7Q91Y13 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdha7Q91Y13 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha7Q91Y13 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha7Q91Y13 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdha7Q91Y13 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdha7Q91Y13 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha7Q91Y13 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.58■■□□□ 1.05
Pcdha7Q91Y13 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha7Q91Y13 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Pcdha7Q91Y13 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha7Q91Y13 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha7Q91Y13 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha7Q91Y13 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha7Q91Y13 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Gm15820-201ENSMUST00000201566 728 ntBASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha7Q91Y13 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha7Q91Y13 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms