Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
StrcQ8VIM6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
StrcQ8VIM6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.14■■□□□ 1.46
StrcQ8VIM6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
StrcQ8VIM6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.14■■□□□ 1.45
StrcQ8VIM6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
StrcQ8VIM6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
StrcQ8VIM6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.12■■□□□ 1.45
StrcQ8VIM6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
StrcQ8VIM6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
StrcQ8VIM6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
StrcQ8VIM6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
StrcQ8VIM6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
StrcQ8VIM6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
StrcQ8VIM6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
StrcQ8VIM6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
StrcQ8VIM6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
StrcQ8VIM6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
StrcQ8VIM6 Mir6982-201ENSMUST00000184354 68 ntBASIC24.09■■□□□ 1.45
StrcQ8VIM6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
StrcQ8VIM6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.09■■□□□ 1.45
StrcQ8VIM6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
StrcQ8VIM6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
StrcQ8VIM6 Gm7977-201ENSMUST00000193787 748 ntBASIC24.08■■□□□ 1.45
StrcQ8VIM6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
StrcQ8VIM6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
StrcQ8VIM6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
StrcQ8VIM6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
StrcQ8VIM6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
StrcQ8VIM6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.06■■□□□ 1.44
StrcQ8VIM6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.06■■□□□ 1.44
StrcQ8VIM6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
StrcQ8VIM6 Gm27275-201ENSMUST00000184318 272 ntBASIC24.05■■□□□ 1.44
StrcQ8VIM6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC24.05■■□□□ 1.44
StrcQ8VIM6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
StrcQ8VIM6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
StrcQ8VIM6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
StrcQ8VIM6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
StrcQ8VIM6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
StrcQ8VIM6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
StrcQ8VIM6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
StrcQ8VIM6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.04■■□□□ 1.44
StrcQ8VIM6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
StrcQ8VIM6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
StrcQ8VIM6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
StrcQ8VIM6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
StrcQ8VIM6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.03■■□□□ 1.44
StrcQ8VIM6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
StrcQ8VIM6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
StrcQ8VIM6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
StrcQ8VIM6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms