Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh18Q8VHR0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdh18Q8VHR0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.89■□□□□ 0.62
Pcdh18Q8VHR0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh18Q8VHR0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh18Q8VHR0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Gm10232-201ENSMUST00000089221 720 ntBASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh18Q8VHR0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh18Q8VHR0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh18Q8VHR0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh18Q8VHR0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms