Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf8Q8VC56 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf8Q8VC56 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf8Q8VC56 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf8Q8VC56 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf8Q8VC56 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf8Q8VC56 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf8Q8VC56 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Gm13241-201ENSMUST00000094493 780 ntBASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf8Q8VC56 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Gm9847-201ENSMUST00000052528 599 ntBASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf8Q8VC56 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Gm9870-201ENSMUST00000063874 645 ntBASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf8Q8VC56 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Gm7143-201ENSMUST00000222811 859 ntBASIC18.85■□□□□ 0.61
Rnf8Q8VC56 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf8Q8VC56 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf8Q8VC56 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms