Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubqln1Q8R317 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubqln1Q8R317 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
Ubqln1Q8R317 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Gm21956-201ENSMUST00000179946 522 ntBASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ubqln1Q8R317 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.59■□□□□ 0.57
Ubqln1Q8R317 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubqln1Q8R317 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubqln1Q8R317 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubqln1Q8R317 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Ubqln1Q8R317 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubqln1Q8R317 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms