Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pdlim2Q8R1G6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pdlim2Q8R1G6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim2Q8R1G6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim2Q8R1G6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim2Q8R1G6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim2Q8R1G6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim2Q8R1G6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pdlim2Q8R1G6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.83■■□□□ 1.24
Pdlim2Q8R1G6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Pdlim2Q8R1G6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
Pdlim2Q8R1G6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim2Q8R1G6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.82■■□□□ 1.24
Pdlim2Q8R1G6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pdlim2Q8R1G6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim2Q8R1G6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim2Q8R1G6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.8■■□□□ 1.24
Pdlim2Q8R1G6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Pdlim2Q8R1G6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim2Q8R1G6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim2Q8R1G6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Pdlim2Q8R1G6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim2Q8R1G6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim2Q8R1G6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms