Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rtn4rl1Q8K0S5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rtn4rl1Q8K0S5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Gm10653-202ENSMUST00000139570 835 ntBASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Rtn4rl1Q8K0S5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4rl1Q8K0S5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4rl1Q8K0S5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4rl1Q8K0S5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn4rl1Q8K0S5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn4rl1Q8K0S5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn4rl1Q8K0S5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.08■□□□□ 0.81
Rtn4rl1Q8K0S5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn4rl1Q8K0S5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Rtn4rl1Q8K0S5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn4rl1Q8K0S5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn4rl1Q8K0S5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn4rl1Q8K0S5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn4rl1Q8K0S5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.07■□□□□ 0.8
Rtn4rl1Q8K0S5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4rl1Q8K0S5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4rl1Q8K0S5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms