Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfwd3Q8CIK8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfwd3Q8CIK8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfwd3Q8CIK8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfwd3Q8CIK8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfwd3Q8CIK8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Gm45417-201ENSMUST00000209533 758 ntBASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfwd3Q8CIK8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfwd3Q8CIK8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfwd3Q8CIK8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfwd3Q8CIK8 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms