Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShfQ8CG80 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.61■□□□□ 0.41
ShfQ8CG80 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShfQ8CG80 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShfQ8CG80 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.6■□□□□ 0.41
ShfQ8CG80 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.6■□□□□ 0.41
ShfQ8CG80 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShfQ8CG80 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.59■□□□□ 0.41
ShfQ8CG80 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ShfQ8CG80 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ShfQ8CG80 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ShfQ8CG80 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShfQ8CG80 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ShfQ8CG80 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShfQ8CG80 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ShfQ8CG80 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShfQ8CG80 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShfQ8CG80 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShfQ8CG80 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
ShfQ8CG80 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShfQ8CG80 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.58■□□□□ 0.4
ShfQ8CG80 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.57■□□□□ 0.4
ShfQ8CG80 Gm7417-201ENSMUST00000192950 473 ntBASIC17.57■□□□□ 0.4
ShfQ8CG80 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShfQ8CG80 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
ShfQ8CG80 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ShfQ8CG80 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShfQ8CG80 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ShfQ8CG80 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.55■□□□□ 0.4
ShfQ8CG80 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.55■□□□□ 0.4
ShfQ8CG80 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.55■□□□□ 0.4
ShfQ8CG80 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShfQ8CG80 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ShfQ8CG80 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ShfQ8CG80 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ShfQ8CG80 Gm15820-201ENSMUST00000201566 728 ntBASIC17.54■□□□□ 0.4
ShfQ8CG80 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ShfQ8CG80 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShfQ8CG80 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.53■□□□□ 0.4
ShfQ8CG80 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.53■□□□□ 0.4
ShfQ8CG80 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
ShfQ8CG80 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShfQ8CG80 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms