Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb7Q8CDY9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb7Q8CDY9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb7Q8CDY9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb7Q8CDY9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb7Q8CDY9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb7Q8CDY9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb7Q8CDY9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb7Q8CDY9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb7Q8CDY9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb7Q8CDY9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb7Q8CDY9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb7Q8CDY9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb7Q8CDY9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms