Protein–RNA interactions for Protein: Q8CC27

Cacnb2, Voltage-dependent L-type calcium channel subunit beta-2, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb2Q8CC27 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb2Q8CC27 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cacnb2Q8CC27 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacnb2Q8CC27 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacnb2Q8CC27 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacnb2Q8CC27 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacnb2Q8CC27 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Gm37179-201ENSMUST00000194862 823 ntBASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacnb2Q8CC27 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Gm42778-201ENSMUST00000199644 553 ntBASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 AV356131-201ENSMUST00000206201 750 ntBASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacnb2Q8CC27 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacnb2Q8CC27 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.36■□□□□ 0.85
Cacnb2Q8CC27 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cacnb2Q8CC27 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Gm9988-201ENSMUST00000069786 435 ntBASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cacnb2Q8CC27 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacnb2Q8CC27 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacnb2Q8CC27 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cacnb2Q8CC27 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cacnb2Q8CC27 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cacnb2Q8CC27 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Gm27801-201ENSMUST00000184174 223 ntBASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cacnb2Q8CC27 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms