Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ppp4r4Q8C0Y0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Gm43137-201ENSMUST00000198052 594 ntBASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp4r4Q8C0Y0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ppp4r4Q8C0Y0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp4r4Q8C0Y0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp4r4Q8C0Y0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp4r4Q8C0Y0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp4r4Q8C0Y0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.83■□□□□ 0.76
Ppp4r4Q8C0Y0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm12821-201ENSMUST00000120022 600 ntBASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm27454-201ENSMUST00000185090 204 ntBASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm45417-201ENSMUST00000209533 758 ntBASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp4r4Q8C0Y0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Mir6236-201ENSMUST00000184437 123 ntBASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp4r4Q8C0Y0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ppp4r4Q8C0Y0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms