Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rsph4aQ8BYM7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph4aQ8BYM7 Gm22325-201ENSMUST00000158904 308 ntBASIC28.41■■■□□ 2.14
Rsph4aQ8BYM7 Gm6420-201ENSMUST00000193885 723 ntBASIC28.41■■■□□ 2.14
Rsph4aQ8BYM7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph4aQ8BYM7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rsph4aQ8BYM7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Gm37856-201ENSMUST00000191634 999 ntBASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rsph4aQ8BYM7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rsph4aQ8BYM7 AC122769.4-201ENSMUST00000228166 901 ntBASIC28.39■■■□□ 2.14
Rsph4aQ8BYM7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Rsph4aQ8BYM7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Rsph4aQ8BYM7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Rsph4aQ8BYM7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rsph4aQ8BYM7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsph4aQ8BYM7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph4aQ8BYM7 Gm38205-201ENSMUST00000192243 258 ntBASIC28.36■■■□□ 2.13
Rsph4aQ8BYM7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph4aQ8BYM7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph4aQ8BYM7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rsph4aQ8BYM7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rsph4aQ8BYM7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rsph4aQ8BYM7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rsph4aQ8BYM7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rsph4aQ8BYM7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Mir7071-201ENSMUST00000184847 69 ntBASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rsph4aQ8BYM7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Trmt13-210ENSMUST00000198454 880 ntBASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Gm44878-201ENSMUST00000205812 1295 ntBASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rsph4aQ8BYM7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rsph4aQ8BYM7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rsph4aQ8BYM7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Rsph4aQ8BYM7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rsph4aQ8BYM7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC28.27■■■□□ 2.12
Rsph4aQ8BYM7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms