Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.77■□□□□ 0.27
Lsm11Q8BUV6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lsm11Q8BUV6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm11Q8BUV6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm11Q8BUV6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm11Q8BUV6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm11Q8BUV6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm11Q8BUV6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm11Q8BUV6 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.71■□□□□ 0.26
Lsm11Q8BUV6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Gm7143-201ENSMUST00000222811 859 ntBASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm11Q8BUV6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm11Q8BUV6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm11Q8BUV6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms