Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptpn7Q8BUM3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ptpn7Q8BUM3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ptpn7Q8BUM3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ptpn7Q8BUM3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Ptpn7Q8BUM3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ptpn7Q8BUM3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Gm7417-201ENSMUST00000192950 473 ntBASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ptpn7Q8BUM3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Gm9870-201ENSMUST00000063874 645 ntBASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ptpn7Q8BUM3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.37■□□□□ 0.53
Ptpn7Q8BUM3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ptpn7Q8BUM3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ptpn7Q8BUM3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms