Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rd3Q8BRE0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
Rd3Q8BRE0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.95■□□□□ 0.94
Rd3Q8BRE0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rd3Q8BRE0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.93■□□□□ 0.94
Rd3Q8BRE0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rd3Q8BRE0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.92■□□□□ 0.94
Rd3Q8BRE0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rd3Q8BRE0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Gm13234-201ENSMUST00000120010 747 ntBASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Gm27801-201ENSMUST00000184174 223 ntBASIC20.91■□□□□ 0.94
Rd3Q8BRE0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Gm10602-201ENSMUST00000098239 609 ntBASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rd3Q8BRE0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rd3Q8BRE0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rd3Q8BRE0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.88■□□□□ 0.93
Rd3Q8BRE0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms