Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Gm43530-201ENSMUST00000195920 274 ntBASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Depdc1bQ8BH88 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Depdc1bQ8BH88 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Depdc1bQ8BH88 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Depdc1bQ8BH88 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Depdc1bQ8BH88 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Depdc1bQ8BH88 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Depdc1bQ8BH88 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Mir6236-201ENSMUST00000184437 123 ntBASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Depdc1bQ8BH88 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Depdc1bQ8BH88 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1bQ8BH88 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Depdc1bQ8BH88 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Depdc1bQ8BH88 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.31■■□□□ 1
Depdc1bQ8BH88 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1bQ8BH88 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.3■■□□□ 1
Depdc1bQ8BH88 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Depdc1bQ8BH88 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Depdc1bQ8BH88 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms