Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trnp1Q80ZI1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Gm22325-201ENSMUST00000158904 308 ntBASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Mir7071-201ENSMUST00000184847 69 ntBASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trnp1Q80ZI1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Gm6420-201ENSMUST00000193885 723 ntBASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trnp1Q80ZI1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.53■■□□□ 1.2
Trnp1Q80ZI1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trnp1Q80ZI1 Gm6211-202ENSMUST00000167849 925 ntBASIC22.53■■□□□ 1.2
Trnp1Q80ZI1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.53■■□□□ 1.2
Trnp1Q80ZI1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Trnp1Q80ZI1 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Gm37856-201ENSMUST00000191634 999 ntBASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Gm38205-201ENSMUST00000192243 258 ntBASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnp1Q80ZI1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Gm10812-201ENSMUST00000099864 546 ntBASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnp1Q80ZI1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Gm13534-201ENSMUST00000121169 513 ntBASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trnp1Q80ZI1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trnp1Q80ZI1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.48■■□□□ 1.19
Trnp1Q80ZI1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnp1Q80ZI1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnp1Q80ZI1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnp1Q80ZI1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnp1Q80ZI1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Trnp1Q80ZI1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms