Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.19■□□□□ 0.5
Pif1Q80SX8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.19■□□□□ 0.5
Pif1Q80SX8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pif1Q80SX8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.19■□□□□ 0.5
Pif1Q80SX8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pif1Q80SX8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pif1Q80SX8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pif1Q80SX8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pif1Q80SX8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pif1Q80SX8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.16■□□□□ 0.5
Pif1Q80SX8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pif1Q80SX8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.15■□□□□ 0.5
Pif1Q80SX8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pif1Q80SX8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Pif1Q80SX8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pif1Q80SX8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pif1Q80SX8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pif1Q80SX8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pif1Q80SX8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.13■□□□□ 0.49
Pif1Q80SX8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pif1Q80SX8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pif1Q80SX8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.11■□□□□ 0.49
Pif1Q80SX8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pif1Q80SX8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.1■□□□□ 0.49
Pif1Q80SX8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms