Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Pcdh8Q7TSK3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh8Q7TSK3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh8Q7TSK3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh8Q7TSK3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh8Q7TSK3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh8Q7TSK3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh8Q7TSK3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh8Q7TSK3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.39■□□□□ 0.69
Pcdh8Q7TSK3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pcdh8Q7TSK3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh8Q7TSK3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms