Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otub1Q7TQI3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.7■□□□□ 0.58
Otub1Q7TQI3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Gm9870-201ENSMUST00000063874 645 ntBASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otub1Q7TQI3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otub1Q7TQI3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otub1Q7TQI3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.67■□□□□ 0.58
Otub1Q7TQI3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otub1Q7TQI3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Otub1Q7TQI3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms