Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.47■■□□□ 1.51
Col11a2Q64739 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col11a2Q64739 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Col11a2Q64739 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Col11a2Q64739 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.46■■□□□ 1.51
Col11a2Q64739 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col11a2Q64739 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Col11a2Q64739 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col11a2Q64739 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.45■■□□□ 1.5
Col11a2Q64739 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC24.45■■□□□ 1.5
Col11a2Q64739 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col11a2Q64739 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Col11a2Q64739 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.44■■□□□ 1.5
Col11a2Q64739 Gm44878-201ENSMUST00000205812 1295 ntBASIC24.44■■□□□ 1.5
Col11a2Q64739 Gm6365-201ENSMUST00000054711 744 ntBASIC24.44■■□□□ 1.5
Col11a2Q64739 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col11a2Q64739 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col11a2Q64739 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Col11a2Q64739 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col11a2Q64739 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.44■■□□□ 1.5
Col11a2Q64739 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Col11a2Q64739 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col11a2Q64739 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col11a2Q64739 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.43■■□□□ 1.5
Col11a2Q64739 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col11a2Q64739 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.43■■□□□ 1.5
Col11a2Q64739 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Col11a2Q64739 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col11a2Q64739 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col11a2Q64739 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.42■■□□□ 1.5
Col11a2Q64739 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col11a2Q64739 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col11a2Q64739 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.41■■□□□ 1.5
Col11a2Q64739 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.41■■□□□ 1.5
Col11a2Q64739 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.41■■□□□ 1.5
Col11a2Q64739 Gm13534-201ENSMUST00000121169 513 ntBASIC24.41■■□□□ 1.5
Col11a2Q64739 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC24.41■■□□□ 1.5
Col11a2Q64739 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.41■■□□□ 1.5
Col11a2Q64739 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.4■■□□□ 1.5
Col11a2Q64739 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.4■■□□□ 1.5
Col11a2Q64739 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
Col11a2Q64739 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col11a2Q64739 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.39■■□□□ 1.5
Col11a2Q64739 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col11a2Q64739 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col11a2Q64739 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col11a2Q64739 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.39■■□□□ 1.49
Col11a2Q64739 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.38■■□□□ 1.49
Col11a2Q64739 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.38■■□□□ 1.49
Col11a2Q64739 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
Col11a2Q64739 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col11a2Q64739 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.38■■□□□ 1.49
Col11a2Q64739 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.37■■□□□ 1.49
Col11a2Q64739 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col11a2Q64739 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Col11a2Q64739 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col11a2Q64739 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col11a2Q64739 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.36■■□□□ 1.49
Col11a2Q64739 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col11a2Q64739 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Col11a2Q64739 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col11a2Q64739 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col11a2Q64739 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col11a2Q64739 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Col11a2Q64739 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.35■■□□□ 1.49
Col11a2Q64739 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col11a2Q64739 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms