Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itm2aQ61500 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Itm2aQ61500 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itm2aQ61500 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itm2aQ61500 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Itm2aQ61500 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 Gm7143-201ENSMUST00000222811 859 ntBASIC19.41■□□□□ 0.7
Itm2aQ61500 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itm2aQ61500 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.4■□□□□ 0.7
Itm2aQ61500 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itm2aQ61500 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
Itm2aQ61500 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Itm2aQ61500 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itm2aQ61500 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itm2aQ61500 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itm2aQ61500 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itm2aQ61500 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itm2aQ61500 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.38■□□□□ 0.69
Itm2aQ61500 Gm43566-201ENSMUST00000196851 808 ntBASIC19.38■□□□□ 0.69
Itm2aQ61500 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itm2aQ61500 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itm2aQ61500 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Itm2aQ61500 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.37■□□□□ 0.69
Itm2aQ61500 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
Itm2aQ61500 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.37■□□□□ 0.69
Itm2aQ61500 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.37■□□□□ 0.69
Itm2aQ61500 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itm2aQ61500 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itm2aQ61500 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itm2aQ61500 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itm2aQ61500 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.36■□□□□ 0.69
Itm2aQ61500 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itm2aQ61500 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itm2aQ61500 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Itm2aQ61500 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Itm2aQ61500 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Itm2aQ61500 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.35■□□□□ 0.69
Itm2aQ61500 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.35■□□□□ 0.69
Itm2aQ61500 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.35■□□□□ 0.69
Itm2aQ61500 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Itm2aQ61500 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itm2aQ61500 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Itm2aQ61500 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.34■□□□□ 0.69
Itm2aQ61500 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.34■□□□□ 0.69
Itm2aQ61500 Cap2-205ENSMUST00000225824 1634 ntBASIC19.34■□□□□ 0.69
Itm2aQ61500 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.34■□□□□ 0.69
Itm2aQ61500 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.34■□□□□ 0.69
Itm2aQ61500 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itm2aQ61500 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Itm2aQ61500 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Itm2aQ61500 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Itm2aQ61500 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Itm2aQ61500 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Itm2aQ61500 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms