Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ift88Q61371 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Ift88Q61371 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ift88Q61371 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.82■■□□□ 1.08
Ift88Q61371 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ift88Q61371 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ift88Q61371 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ift88Q61371 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ift88Q61371 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.81■■□□□ 1.08
Ift88Q61371 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ift88Q61371 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ift88Q61371 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ift88Q61371 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ift88Q61371 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ift88Q61371 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.79■■□□□ 1.08
Ift88Q61371 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ift88Q61371 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.79■■□□□ 1.08
Ift88Q61371 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.79■■□□□ 1.08
Ift88Q61371 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ift88Q61371 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ift88Q61371 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ift88Q61371 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ift88Q61371 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ift88Q61371 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.78■■□□□ 1.08
Ift88Q61371 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ift88Q61371 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ift88Q61371 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ift88Q61371 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Ift88Q61371 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ift88Q61371 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ift88Q61371 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ift88Q61371 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
Ift88Q61371 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.76■■□□□ 1.07
Ift88Q61371 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.76■■□□□ 1.07
Ift88Q61371 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ift88Q61371 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ift88Q61371 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ift88Q61371 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ift88Q61371 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ift88Q61371 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.75■■□□□ 1.07
Ift88Q61371 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ift88Q61371 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Ift88Q61371 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ift88Q61371 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ift88Q61371 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ift88Q61371 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ift88Q61371 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.75■■□□□ 1.07
Ift88Q61371 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ift88Q61371 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ift88Q61371 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ift88Q61371 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ift88Q61371 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.74■■□□□ 1.07
Ift88Q61371 Gm15820-201ENSMUST00000201566 728 ntBASIC21.74■■□□□ 1.07
Ift88Q61371 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ift88Q61371 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Ift88Q61371 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ift88Q61371 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.73■■□□□ 1.07
Ift88Q61371 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.73■■□□□ 1.07
Ift88Q61371 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.73■■□□□ 1.07
Ift88Q61371 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ift88Q61371 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Ift88Q61371 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.72■■□□□ 1.07
Ift88Q61371 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ift88Q61371 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ift88Q61371 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.72■■□□□ 1.07
Ift88Q61371 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ift88Q61371 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ift88Q61371 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ift88Q61371 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ift88Q61371 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.72■■□□□ 1.07
Ift88Q61371 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ift88Q61371 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ift88Q61371 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms