Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf43Q5NCP0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf43Q5NCP0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnf43Q5NCP0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rnf43Q5NCP0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf43Q5NCP0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf43Q5NCP0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Rnf43Q5NCP0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf43Q5NCP0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.08■□□□□ 0.81
Rnf43Q5NCP0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf43Q5NCP0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf43Q5NCP0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf43Q5NCP0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.07■□□□□ 0.8
Rnf43Q5NCP0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf43Q5NCP0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Gm7514-201ENSMUST00000209475 934 ntBASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.06■□□□□ 0.8
Rnf43Q5NCP0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf43Q5NCP0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms