Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc2Q4U2R1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Gm9103-201ENSMUST00000119371 405 ntBASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Rab3c-203ENSMUST00000224180 967 ntBASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc2Q4U2R1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.05□□□□□ -0.48
Herc2Q4U2R1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Gm38205-201ENSMUST00000192243 258 ntBASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Ank2-226ENSMUST00000189368 339 ntBASIC12.04□□□□□ -0.48
Herc2Q4U2R1 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Herc2Q4U2R1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Herc2Q4U2R1 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.03□□□□□ -0.48
Herc2Q4U2R1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Herc2Q4U2R1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc2Q4U2R1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Herc2Q4U2R1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.02□□□□□ -0.48
Herc2Q4U2R1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Herc2Q4U2R1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc2Q4U2R1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gm15378-201ENSMUST00000121894 207 ntBASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gm5417-201ENSMUST00000079706 384 ntBASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms