Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnga4Q3UW12 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.98■□□□□ 0.79
Cnga4Q3UW12 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnga4Q3UW12 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Gm11175-201ENSMUST00000116172 543 ntBASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cnga4Q3UW12 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cnga4Q3UW12 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Gm12366-201ENSMUST00000121722 873 ntBASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Gm5786-201ENSMUST00000085368 882 ntBASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cnga4Q3UW12 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cnga4Q3UW12 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cnga4Q3UW12 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cnga4Q3UW12 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms