Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1d1Q3UV55 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Gm13241-201ENSMUST00000094493 780 ntBASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Golph3-205ENSMUST00000228671 2842 ntBASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1d1Q3UV55 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Serp2-204ENSMUST00000228055 705 ntBASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1d1Q3UV55 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1d1Q3UV55 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Gm21956-201ENSMUST00000179946 522 ntBASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1d1Q3UV55 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nr1d1Q3UV55 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1d1Q3UV55 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1d1Q3UV55 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1d1Q3UV55 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Gm9847-201ENSMUST00000052528 599 ntBASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1d1Q3UV55 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Nr1d1Q3UV55 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1d1Q3UV55 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1d1Q3UV55 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms