Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Terc-201ENSMUST00000082862 423 ntBASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1brtQ3UNC9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cks1brtQ3UNC9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cks1brtQ3UNC9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Gm9812-201ENSMUST00000061934 968 ntBASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cks1brtQ3UNC9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.25□□□□□ -0.13
Cks1brtQ3UNC9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1brtQ3UNC9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Golph3-205ENSMUST00000228671 2842 ntBASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1brtQ3UNC9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cks1brtQ3UNC9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms