Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.89■□□□□ 0.29
Smn1P97801 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smn1P97801 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smn1P97801 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smn1P97801 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.87■□□□□ 0.29
Smn1P97801 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.87■□□□□ 0.29
Smn1P97801 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smn1P97801 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smn1P97801 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Smn1P97801 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smn1P97801 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smn1P97801 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.86■□□□□ 0.29
Smn1P97801 Gm10399-202ENSMUST00000202768 748 ntBASIC16.86■□□□□ 0.29
Smn1P97801 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smn1P97801 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.86■□□□□ 0.29
Smn1P97801 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.86■□□□□ 0.29
Smn1P97801 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smn1P97801 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smn1P97801 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smn1P97801 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Gm13238-201ENSMUST00000117655 780 ntBASIC16.85■□□□□ 0.29
Smn1P97801 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.85■□□□□ 0.29
Smn1P97801 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.85■□□□□ 0.29
Smn1P97801 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Smn1P97801 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smn1P97801 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.84■□□□□ 0.29
Smn1P97801 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.84■□□□□ 0.29
Smn1P97801 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.84■□□□□ 0.29
Smn1P97801 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smn1P97801 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smn1P97801 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Smn1P97801 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smn1P97801 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smn1P97801 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smn1P97801 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smn1P97801 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smn1P97801 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.83■□□□□ 0.28
Smn1P97801 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smn1P97801 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smn1P97801 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smn1P97801 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smn1P97801 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Smn1P97801 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smn1P97801 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smn1P97801 Golph3-205ENSMUST00000228671 2842 ntBASIC16.82■□□□□ 0.28
Smn1P97801 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smn1P97801 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smn1P97801 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.82■□□□□ 0.28
Smn1P97801 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smn1P97801 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.81■□□□□ 0.28
Smn1P97801 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smn1P97801 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms