Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shox2P70390 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shox2P70390 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Shox2P70390 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.59■□□□□ 0.73
Shox2P70390 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.59■□□□□ 0.73
Shox2P70390 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Shox2P70390 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Shox2P70390 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.59■□□□□ 0.73
Shox2P70390 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shox2P70390 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Shox2P70390 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Shox2P70390 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shox2P70390 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Shox2P70390 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Shox2P70390 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.58■□□□□ 0.73
Shox2P70390 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shox2P70390 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.58■□□□□ 0.73
Shox2P70390 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shox2P70390 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shox2P70390 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shox2P70390 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Shox2P70390 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.58■□□□□ 0.72
Shox2P70390 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shox2P70390 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Shox2P70390 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.57■□□□□ 0.72
Shox2P70390 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shox2P70390 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.56■□□□□ 0.72
Shox2P70390 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Shox2P70390 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Shox2P70390 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shox2P70390 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.56■□□□□ 0.72
Shox2P70390 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shox2P70390 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.55■□□□□ 0.72
Shox2P70390 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shox2P70390 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.55■□□□□ 0.72
Shox2P70390 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.54■□□□□ 0.72
Shox2P70390 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.54■□□□□ 0.72
Shox2P70390 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.54■□□□□ 0.72
Shox2P70390 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shox2P70390 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Shox2P70390 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.53■□□□□ 0.72
Shox2P70390 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shox2P70390 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Shox2P70390 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shox2P70390 Gm9806-201ENSMUST00000051080 552 ntBASIC19.52■□□□□ 0.72
Shox2P70390 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shox2P70390 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Shox2P70390 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms