Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpl39P62892 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpl39P62892 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpl39P62892 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39P62892 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpl39P62892 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.03□□□□□ -0.16
Rpl39P62892 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rpl39P62892 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.03□□□□□ -0.16
Rpl39P62892 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39P62892 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpl39P62892 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39P62892 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpl39P62892 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rpl39P62892 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.02□□□□□ -0.17
Rpl39P62892 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpl39P62892 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpl39P62892 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39P62892 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39P62892 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.02□□□□□ -0.17
Rpl39P62892 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39P62892 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39P62892 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rpl39P62892 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpl39P62892 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpl39P62892 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpl39P62892 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpl39P62892 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39P62892 Gm5784-201ENSMUST00000179344 2478 ntBASIC14□□□□□ -0.17
Rpl39P62892 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpl39P62892 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpl39P62892 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39P62892 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39P62892 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39P62892 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39P62892 Gm10420-201ENSMUST00000121713 882 ntBASIC13.99□□□□□ -0.17
Rpl39P62892 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39P62892 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39P62892 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.98□□□□□ -0.17
Rpl39P62892 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rpl39P62892 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.98□□□□□ -0.17
Rpl39P62892 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Rpl39P62892 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpl39P62892 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Rpl39P62892 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39P62892 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rpl39P62892 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.97□□□□□ -0.17
Rpl39P62892 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpl39P62892 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39P62892 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms