Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpm1P58771 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Tpm1P58771 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tpm1P58771 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tpm1P58771 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpm1P58771 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tpm1P58771 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tpm1P58771 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Tpm1P58771 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Tpm1P58771 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tpm1P58771 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.91■■□□□ 1.1
Tpm1P58771 Gm45444-201ENSMUST00000211394 898 ntBASIC21.91■■□□□ 1.1
Tpm1P58771 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpm1P58771 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.9■■□□□ 1.1
Tpm1P58771 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Tpm1P58771 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.9■■□□□ 1.1
Tpm1P58771 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Tpm1P58771 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tpm1P58771 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.89■■□□□ 1.1
Tpm1P58771 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tpm1P58771 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tpm1P58771 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tpm1P58771 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
Tpm1P58771 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tpm1P58771 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Tpm1P58771 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Tpm1P58771 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Tpm1P58771 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpm1P58771 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Tpm1P58771 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Tpm1P58771 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.87■■□□□ 1.09
Tpm1P58771 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Tpm1P58771 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpm1P58771 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.86■■□□□ 1.09
Tpm1P58771 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Tpm1P58771 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tpm1P58771 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.86■■□□□ 1.09
Tpm1P58771 Gm10399-202ENSMUST00000202768 748 ntBASIC21.86■■□□□ 1.09
Tpm1P58771 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms