Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sssca1P56873 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.9■□□□□ 0.14
Sssca1P56873 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.9■□□□□ 0.14
Sssca1P56873 Gm43566-201ENSMUST00000196851 808 ntBASIC15.9■□□□□ 0.14
Sssca1P56873 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.9■□□□□ 0.14
Sssca1P56873 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Sssca1P56873 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sssca1P56873 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Sssca1P56873 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.89■□□□□ 0.13
Sssca1P56873 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sssca1P56873 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sssca1P56873 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Gm13238-201ENSMUST00000117655 780 ntBASIC15.88■□□□□ 0.13
Sssca1P56873 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Gm7143-201ENSMUST00000222811 859 ntBASIC15.88■□□□□ 0.13
Sssca1P56873 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sssca1P56873 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Sssca1P56873 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.88■□□□□ 0.13
Sssca1P56873 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sssca1P56873 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Sssca1P56873 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.87■□□□□ 0.13
Sssca1P56873 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sssca1P56873 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sssca1P56873 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sssca1P56873 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Sssca1P56873 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sssca1P56873 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.86■□□□□ 0.13
Sssca1P56873 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sssca1P56873 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.86■□□□□ 0.13
Sssca1P56873 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.86■□□□□ 0.13
Sssca1P56873 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.86■□□□□ 0.13
Sssca1P56873 Gm10232-201ENSMUST00000089221 720 ntBASIC15.86■□□□□ 0.13
Sssca1P56873 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sssca1P56873 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.85■□□□□ 0.13
Sssca1P56873 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.85■□□□□ 0.13
Sssca1P56873 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.85■□□□□ 0.13
Sssca1P56873 Gm5921-201ENSMUST00000075898 882 ntBASIC15.85■□□□□ 0.13
Sssca1P56873 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Sssca1P56873 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.85■□□□□ 0.13
Sssca1P56873 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Sssca1P56873 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.85■□□□□ 0.13
Sssca1P56873 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sssca1P56873 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Cap2-205ENSMUST00000225824 1634 ntBASIC15.84■□□□□ 0.13
Sssca1P56873 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.84■□□□□ 0.13
Sssca1P56873 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sssca1P56873 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms