Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lbx1P52955 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lbx1P52955 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.23■□□□□ 0.67
Lbx1P52955 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lbx1P52955 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lbx1P52955 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lbx1P52955 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lbx1P52955 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lbx1P52955 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lbx1P52955 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lbx1P52955 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Lbx1P52955 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Lbx1P52955 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.22■□□□□ 0.67
Lbx1P52955 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lbx1P52955 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.22■□□□□ 0.67
Lbx1P52955 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lbx1P52955 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lbx1P52955 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Lbx1P52955 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lbx1P52955 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lbx1P52955 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Lbx1P52955 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lbx1P52955 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lbx1P52955 Gm12896-201ENSMUST00000118430 226 ntBASIC19.2■□□□□ 0.66
Lbx1P52955 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lbx1P52955 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lbx1P52955 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lbx1P52955 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lbx1P52955 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.19■□□□□ 0.66
Lbx1P52955 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.19■□□□□ 0.66
Lbx1P52955 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.19■□□□□ 0.66
Lbx1P52955 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lbx1P52955 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Gm11249-201ENSMUST00000117071 859 ntBASIC19.18■□□□□ 0.66
Lbx1P52955 Gm6433-201ENSMUST00000118634 875 ntBASIC19.18■□□□□ 0.66
Lbx1P52955 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.18■□□□□ 0.66
Lbx1P52955 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lbx1P52955 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lbx1P52955 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.17■□□□□ 0.66
Lbx1P52955 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
Lbx1P52955 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lbx1P52955 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lbx1P52955 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lbx1P52955 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lbx1P52955 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
Lbx1P52955 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.17■□□□□ 0.66
Lbx1P52955 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lbx1P52955 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Lbx1P52955 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lbx1P52955 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Lbx1P52955 Rab3c-203ENSMUST00000224180 967 ntBASIC19.16■□□□□ 0.66
Lbx1P52955 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lbx1P52955 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Lbx1P52955 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lbx1P52955 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lbx1P52955 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Lbx1P52955 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lbx1P52955 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.15■□□□□ 0.66
Lbx1P52955 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lbx1P52955 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lbx1P52955 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lbx1P52955 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lbx1P52955 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lbx1P52955 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lbx1P52955 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lbx1P52955 Gm26524-201ENSMUST00000192339 390 ntBASIC19.14■□□□□ 0.65
Lbx1P52955 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lbx1P52955 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lbx1P52955 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Lbx1P52955 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.13■□□□□ 0.65
Lbx1P52955 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lbx1P52955 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lbx1P52955 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.13■□□□□ 0.65
Lbx1P52955 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lbx1P52955 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lbx1P52955 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lbx1P52955 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.13■□□□□ 0.65
Lbx1P52955 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lbx1P52955 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms