Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.96□□□□□ -0.34
Xcl1P47993 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.96□□□□□ -0.34
Xcl1P47993 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Xcl1P47993 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xcl1P47993 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xcl1P47993 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.95□□□□□ -0.34
Xcl1P47993 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Xcl1P47993 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Xcl1P47993 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Xcl1P47993 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xcl1P47993 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.94□□□□□ -0.34
Xcl1P47993 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Xcl1P47993 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Xcl1P47993 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.93□□□□□ -0.34
Xcl1P47993 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Xcl1P47993 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Xcl1P47993 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Xcl1P47993 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 AC117245.4-201ENSMUST00000217388 1646 ntBASIC12.92□□□□□ -0.34
Xcl1P47993 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Xcl1P47993 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Xcl1P47993 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC12.92□□□□□ -0.34
Xcl1P47993 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Xcl1P47993 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Xcl1P47993 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Xcl1P47993 AC158990.1-201ENSMUST00000221450 2016 ntBASIC12.91□□□□□ -0.34
Xcl1P47993 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.91□□□□□ -0.34
Xcl1P47993 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.91□□□□□ -0.34
Xcl1P47993 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Xcl1P47993 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms