Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gli1P47806 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.16■□□□□ 0.66
Gli1P47806 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Gli1P47806 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli1P47806 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli1P47806 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Gli1P47806 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.14■□□□□ 0.65
Gli1P47806 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli1P47806 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gli1P47806 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Gli1P47806 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gli1P47806 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli1P47806 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gli1P47806 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.12■□□□□ 0.65
Gli1P47806 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gli1P47806 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.12■□□□□ 0.65
Gli1P47806 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.12■□□□□ 0.65
Gli1P47806 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gli1P47806 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.12■□□□□ 0.65
Gli1P47806 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Gli1P47806 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gli1P47806 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.11■□□□□ 0.65
Gli1P47806 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
Gli1P47806 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.11■□□□□ 0.65
Gli1P47806 Golgb1-201ENSMUST00000023534 498 ntBASIC19.11■□□□□ 0.65
Gli1P47806 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gli1P47806 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Gli1P47806 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Gli1P47806 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.1■□□□□ 0.65
Gli1P47806 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gli1P47806 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Gli1P47806 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gli1P47806 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli1P47806 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Gli1P47806 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.09■□□□□ 0.65
Gli1P47806 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Gli1P47806 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gli1P47806 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gli1P47806 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gli1P47806 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gli1P47806 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gli1P47806 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.08■□□□□ 0.64
Gli1P47806 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.08■□□□□ 0.64
Gli1P47806 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gli1P47806 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Gli1P47806 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gli1P47806 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gli1P47806 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gli1P47806 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli1P47806 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli1P47806 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gli1P47806 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gli1P47806 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli1P47806 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gli1P47806 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.07■□□□□ 0.64
Gli1P47806 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms